Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7011313 chr8:3252114 C/T CSMD1 chr8:2792875-4852494:- 0.53 6.13 1.83E-9 Box Plot
THCA rs7011756 chr8:11019578 C/G SGK223 chr8:8175258-8244008:- 0.5 9.91 3.46E-21 Box Plot
THCA rs7011924 chr8:11780593 G/A SGK223 chr8:8175258-8244008:- 0.37 6.65 8.19E-11 Box Plot
THCA rs7012446 chr8:11780944 G/C SGK223 chr8:8175258-8244008:- 0.36 6.49 2.15E-10 Box Plot
THCA rs7013224 chr8:29589697 A/G SLC37A4 chr11:118894824-118901616:- 0.53 5.93 5.92E-9 Box Plot
THCA rs7014229 chr8:3264739 C/T CSMD1 chr8:2792875-4852494:- 0.5 10.14 5.21E-22 Box Plot
THCA rs7014580 chr8:11803262 C/G SGK223 chr8:8175258-8244008:- -0.44 -8.12 3.96E-15 Box Plot
THCA rs7014696 chr8:3230146 T/G CSMD1 chr8:2792875-4852494:- -0.41 -6.8 3.13E-11 Box Plot
THCA rs7014983 chr8:10295826 T/A SGK223 chr8:8175258-8244008:- 0.37 5.9 7.02E-9 Box Plot
THCA rs7015168 chr8:10772210 G/C SGK223 chr8:8175258-8244008:- 0.36 7.24 1.79E-12 Box Plot
THCA rs7015814 chr8:11784403 A/T SGK223 chr8:8175258-8244008:- 0.36 6.55 1.45E-10 Box Plot
THCA rs7015988 chr8:140166345 A/C ESPNP chr1:17013834-17046652:- -0.52 -5.91 6.48E-9 Box Plot
THCA rs7016320 chr8:11781052 G/C SGK223 chr8:8175258-8244008:- 0.37 6.68 6.75E-11 Box Plot
THCA rs7016361 chr8:10867349 C/T SGK223 chr8:8175258-8244008:- 0.4 6.91 1.52E-11 Box Plot
THCA rs7016385 chr8:10779472 A/G SGK223 chr8:8175258-8244008:- -0.36 -7.01 7.9E-12 Box Plot